Heart muscle cells change their energy source during heart regeneration

Researchers from the group of Jeroen Bakkers at the Hubrecht Institute (KNAW) have found that the muscle cells in the heart of zebrafish change their metabolism, the way in which they generate energy, during heart regeneration. Contrary to the human heart, the zebrafish heart can regenerate after injury. Studying the mechanisms of regeneration in zebrafish hearts may help to better understand why the human heart does not regenerate, and find ways to stimulate regeneration after a heart attack in humans in the future. The results from this study were published in the scientific journal eLife on the 4thof February.

Heart attacks are a common cause of death in the Western world. During a heart attack, coronary arteries get occluded, leading to a decrease of oxygen and nutrients to the heart muscle cells supplied by this artery. These low levels of essential nutrients lead to the death of heart muscle cells, which are cleared by the immune system and replaced by a permanent scar to heal the injury. The scar, although good for stabilization of the injured heart, is dysfunctional and will lead to a loss of cardiac function of patients. This results in a lower quality of life for affected patients and makes them more likely to die as a result heart failure.

Border zone

Whereas mammals, such as humans, are unable to repair their heart with functional muscle cells after injury, several other animal species have the remarkable capacity to do this through a process called regeneration. One of these species is the zebrafish. As there are no stem cells present in the heart that could replenish the heart muscle cells, zebrafish use an alternative strategy to restore cardiac function. Surviving heart muscle cells in a region close to the injury site (the so-called border zone) are able to divide and repopulate the injured part of the heart with new muscle cells, replacing the initially formed scar within 3-6 months after injury. How zebrafish achieve this remains largely unknown but holds great potential to help human hearts regenerate after a heart attack.


To learn more about the processes underlying the successful regeneration of the heart in zebrafish, the researchers used a technique called single cell RNA sequencing on the heart muscle cells in the border zone. With this technique, they were able to investigate the activity of all possible genes in individual heart muscle cells in the border zone. The activity of genes told the researchers which processes occur in these individual cells that enable them to divide and thereby generate new heart muscle cells. The researchers discovered that the heart muscle cells in the border zone that start dividing are very similar to embryonic heart muscle cells.

“A striking difference between the border zone heart muscle cells and the other heart muscle cells further away from the injury was that they had completely altered their metabolism,” says Hessel Honkoop (Hubrecht Institute). Instead of using fatty acids as a main energy source, the border zone heart muscle cells relied on sugars, in a pathway called glycolysis, to produce energy and building blocks for their cell division. This switch in energy source turned out to be very important for heart regeneration, since blocking glycolysis severely impaired the ability of the heart muscle cells to divide.

Dividing heart muscle cells

To investigate how this finding could ultimately lead to benefits for patients the researchers looked at the mechanisms involved in this switch in metabolism. They found out that a signaling pathway in which the proteins Nrg1 and ErbB2 are involved can induce the metabolic switch during zebrafish heart regeneration. Increasing the activity of these proteins stimulates the heart muscle cells to divide in both zebrafish and mice, even without an injury in the heart. The researchers noticed that the increased cell division induced by Nrg1 and ErbB2 in mice was accompanied by the same metabolic switch they found in the zebrafish during heart regeneration.

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